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WormBase Tree Display for CDS: Y82E9BL.11

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Name Class

Y82E9BL.11EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceY82E9BL
StructureSource_exons171
17642388
24372646
DB_infoDatabaseTrEMBLUniProtAccQ9GR37
UniProtUniProtAccQ9GR37
UniProt_GCRPUniProtAccQ9GR37
AlphaFoldentryQ9GR37
NCBI_proteinGI_numberGI:351051478
TREEFAMTREEFAM_IDTF322006
Protein_idCHROMOSOME_IIICCD738961
DB_remarkFBXA-15 protein; contains similarity to Pfam domains PF00646 (F-box domain), PF01827 (FTH domain); contains similarity to Interpro domains IPR002900 (Domain of unknown function DUF38/FTH, Caenorhabditis species), IPR036047 (F-box-like domain superfamily), IPR001810 (F-box domain), IPR040161 (F-box A protein FB224)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00022327
Corresponding_transcriptY82E9BL.11.1
Corresponding_proteinCE23394
Corresponding_PCR_productcenix:63-f10
sjj_Y119D3_457.c
Corresponding_oligo_set (12)
Matching_cDNAmale_Nanopore_Roach_102589
L3_Nanopore_Roach_52042Inferred_automaticallytranscript_builder.pl
L1_Nanopore_Li_237766Inferred_automaticallytranscript_builder.pl
RNAi_resultWBRNAi00058566
WBRNAi00020012
Microarray_results (13)
Brief_identificationF-box domain-containing proteinAccession_evidenceUniProtTR:Q9GR37
RNASeq_FPKM (74)
Methodcurated