WormBase Tree Display for CDS: Y82E9BL.11
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Y82E9BL.11 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y82E9BL | |||
Structure | Source_exons | 1 | 71 | |||
1764 | 2388 | |||||
2437 | 2646 | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q9GR37 | ||
UniProt | UniProtAcc | Q9GR37 | ||||
UniProt_GCRP | UniProtAcc | Q9GR37 | ||||
AlphaFold | entry | Q9GR37 | ||||
NCBI_protein | GI_number | GI:351051478 | ||||
TREEFAM | TREEFAM_ID | TF322006 | ||||
Protein_id | CHROMOSOME_III | CCD73896 | 1 | |||
DB_remark | FBXA-15 protein; contains similarity to Pfam domains PF00646 (F-box domain), PF01827 (FTH domain); contains similarity to Interpro domains IPR002900 (Domain of unknown function DUF38/FTH, Caenorhabditis species), IPR036047 (F-box-like domain superfamily), IPR001810 (F-box domain), IPR040161 (F-box A protein FB224) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00022327 | ||||
Corresponding_transcript | Y82E9BL.11.1 | |||||
Corresponding_protein | CE23394 | |||||
Corresponding_PCR_product | cenix:63-f10 | |||||
sjj_Y119D3_457.c | ||||||
Corresponding_oligo_set (12) | ||||||
Matching_cDNA | male_Nanopore_Roach_102589 | |||||
L3_Nanopore_Roach_52042 | Inferred_automatically | transcript_builder.pl | ||||
L1_Nanopore_Li_237766 | Inferred_automatically | transcript_builder.pl | ||||
RNAi_result | WBRNAi00058566 | |||||
WBRNAi00020012 | ||||||
Microarray_results (13) | ||||||
Brief_identification | F-box domain-containing protein | Accession_evidence | UniProt | TR:Q9GR37 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |