WormBase Tree Display for CDS: Y6B3A.1a
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| Y6B3A.1a | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_I | ||
| Structure | Source_exons (19) | ||||
| DB_info | Database | TrEMBL | UniProtAcc | G5EFH7 | |
| UniProt | UniProtAcc | G5EFH7 | |||
| UniProt_GCRP | UniProtAcc | G5EFH7 | |||
| AlphaFold | entry | G5EFH7 | |||
| NCBI_protein | GI_number | GI:166157187 | |||
| Protein_id | CHROMOSOME_I | CAA21704 | 3 | ||
| DB_remark | AGEF-1 protein; contains similarity to Pfam domains PF01369 (Sec7 domain), PF09324 (Mon2/Sec7/BIG1-like, HDS), PF12783 (Mon2/Sec7/BIG1-like, HUS domain), PF16213 (Mon2/Sec7/BIG1-like, dimerisation and cyclophilin-binding domain), PF20252 (BIG2 C-terminal domain); contains similarity to Interpro domains IPR032629 (Mon2/Sec7/BIG1-like, dimerisation and cyclophilin-binding domain), IPR000904 (Sec7 domain), IPR046455 (Sec7/BIG1-like, C-terminal domain), IPR015403 (Mon2/Sec7/BIG1-like, HDS), IPR035999 (Sec7 domain superfamily), IPR011989 (Armadillo-like helical), IPR023394 (Sec7, C-terminal domain superfamily), IPR032691 (Mon2/Sec7/BIG1-like, HUS domain), IPR016024 (Armadillo-type fold) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform | Accession_evidence | NDB | C64114 | ||
| Inferred_automatically | transcript_builder | ||||
| Visible (12) | |||||
| Associated_feature | WBsf014563 | ||||
| WBsf021306 | |||||
| Method | curated |
