WormBase Tree Display for CDS: Y60A9.3
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| Y60A9.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y60A9A | |||
| Structure | Source_exons | 1 | 612 | |||
| DB_info | Database | TrEMBL | UniProtAcc | Q9U1Y2 | ||
| UniProt | UniProtAcc | Q9U1Y2 | ||||
| UniProt_GCRP | UniProtAcc | Q9U1Y2 | ||||
| AlphaFold | entry | Q9U1Y2 | ||||
| NCBI_protein | GI_number | GI:6425437 | ||||
| TREEFAM | TREEFAM_ID | TF315463 | ||||
| Protein_id | CHROMOSOME_X | CAB60410 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF00642 (Zinc finger C-x8-C-x5-C-x3-H type (and similar)); contains similarity to Interpro domains IPR045877 (RNA-binding protein ZFP36-like), IPR000571 (Zinc finger, CCCH-type), IPR036855 (Zinc finger, CCCH-type superfamily) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00013370 | ||||
| Corresponding_transcript | Y60A9.3.1 | |||||
| Corresponding_protein | CE22669 | |||||
| Corresponding_PCR_product | cenix:66-c12 | |||||
| mv_Y60A9.3 | ||||||
| sjj_Y60A9B.a | ||||||
| Corresponding_oligo_set (15) | ||||||
| Matching_cDNA | adult_Nanopore_Roach_21952 | |||||
| RNAi_result | WBRNAi00092046 | |||||
| WBRNAi00057824 | ||||||
| WBRNAi00037659 | ||||||
| WBRNAi00021196 | ||||||
| Microarray_results (16) | ||||||
| Brief_identification | C3H1-type domain-containing protein | Accession_evidence | UniProt | TR:Q9U1Y2 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
