WormBase Tree Display for CDS: Y53H1B.1
expand all nodes | collapse all nodes | view schema
| Y53H1B.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y53H1B | |||
| Structure | Source_exons | 1 | 85 | |||
| 775 | 875 | |||||
| 928 | 1020 | |||||
| 1072 | 1220 | |||||
| 1269 | 1411 | |||||
| 1459 | 1706 | |||||
| 2033 | 2234 | |||||
| 2339 | 2529 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q9U250 | ||
| UniProt | UniProtAcc | Q9U250 | ||||
| UniProt_GCRP | UniProtAcc | Q9U250 | ||||
| AlphaFold | entry | Q9U250 | ||||
| NCBI_protein | GI_number | GI:6425376 | ||||
| TREEFAM | TREEFAM_ID | TF315307 | ||||
| Protein_id | CHROMOSOME_I | CAB60411 | 1 | |||
| DB_remark | CUTL-10 protein; contains similarity to Pfam domain PF00100 (Zona pellucida-like domain); contains similarity to Interpro domain IPR001507 (Zona pellucida domain) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00013180 | ||||
| Corresponding_transcript | Y53H1B.1.1 | |||||
| Corresponding_protein | CE22434 | |||||
| Corresponding_PCR_product | cenix:117-f4 | |||||
| mv_Y53H1B.1 | ||||||
| sjj_Y53H1B.b | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA (20) | ||||||
| RNAi_result | WBRNAi00057328 | |||||
| WBRNAi00004718 | ||||||
| WBRNAi00037448 | ||||||
| WBRNAi00000375 | ||||||
| Microarray_results (18) | ||||||
| Brief_identification | ZP domain-containing protein | Accession_evidence | UniProt | TR:Q9U250 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
