WormBase Tree Display for CDS: Y53F4B.3
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Y53F4B.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y53F4B | |||
Structure | Source_exons | 1 | 198 | |||
255 | 339 | |||||
389 | 645 | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q9NAC5 | ||
UniProt | UniProtAcc | Q9NAC5 | ||||
UniProt_GCRP | UniProtAcc | Q9NAC5 | ||||
AlphaFold | entry | Q9NAC5 | ||||
NCBI_protein | GI_number | GI:6434520 | ||||
TREEFAM | TREEFAM_ID | TF103009 | ||||
Protein_id | CHROMOSOME_II | CAB61070 | 1 | |||
DB_remark | POLE-4 protein; contains similarity to Pfam domain PF00808 (Histone-like transcription factor (CBF/NF-Y) and archaeal histone); contains similarity to Interpro domains IPR009072 (Histone-fold), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone domain) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00013150 | ||||
Corresponding_transcript | Y53F4B.3.1 | |||||
Corresponding_protein | CE22389 | |||||
Corresponding_PCR_product | cenix:117-g2 | |||||
mv_Y53F4B.3 | ||||||
sjj_Y53F4B.d | ||||||
Corresponding_oligo_set (18) | ||||||
Matching_cDNA (27) | ||||||
RNAi_result | WBRNAi00037423 | |||||
WBRNAi00086208 | ||||||
WBRNAi00086207 | ||||||
WBRNAi00061936 | ||||||
WBRNAi00020921 | ||||||
WBRNAi00057283 | ||||||
Microarray_results (19) | ||||||
Brief_identification | Transcription factor CBF/NF-Y/archaeal histone domain-containing protein | Accession_evidence | UniProt | TR:Q9NAC5 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf015319 | |||||
Method | curated |