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WormBase Tree Display for CDS: Y43F8B.5

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Name Class

Y43F8B.5EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceY43F8B
StructureSource_exons1183
465778
827926
DB_infoDatabaseTrEMBLUniProtAccQ9XWX3
UniProtUniProtAccQ9XWX3
UniProt_GCRPUniProtAccQ9XWX3
AlphaFoldentryQ9XWX3
NCBI_proteinGI_numberGI:3947628
TREEFAMTREEFAM_IDTF352352
Protein_idCHROMOSOME_VCAA215131
DB_remarkSCL-21 protein; contains similarity to Pfam domain PF00188 (Cysteine-rich secretory protein family); contains similarity to Interpro domains IPR014044 (CAP domain), IPR035940 (CAP superfamily), IPR001283 (Cysteine-rich secretory protein-related)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00012816
Corresponding_transcriptY43F8B.5.1
Corresponding_proteinCE21890
Corresponding_PCR_productcenix:189-g5
mv_Y43F8B.5
sjj_Y116F11A.gg
sjj_Y43F8B.5
smd_Y116F11A.gg
Corresponding_oligo_set (14)
RNAi_resultWBRNAi00020557
WBRNAi00019948
WBRNAi00056514
Microarray_results (17)
Brief_identificationSCP domain-containing proteinAccession_evidenceUniProtTR:Q9XWX3
RNASeq_FPKM (74)
Methodcurated