WormBase Tree Display for CDS: Y43F8B.5
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Y43F8B.5 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y43F8B | |||
Structure | Source_exons | 1 | 183 | |||
465 | 778 | |||||
827 | 926 | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q9XWX3 | ||
UniProt | UniProtAcc | Q9XWX3 | ||||
UniProt_GCRP | UniProtAcc | Q9XWX3 | ||||
AlphaFold | entry | Q9XWX3 | ||||
NCBI_protein | GI_number | GI:3947628 | ||||
TREEFAM | TREEFAM_ID | TF352352 | ||||
Protein_id | CHROMOSOME_V | CAA21513 | 1 | |||
DB_remark | SCL-21 protein; contains similarity to Pfam domain PF00188 (Cysteine-rich secretory protein family); contains similarity to Interpro domains IPR014044 (CAP domain), IPR035940 (CAP superfamily), IPR001283 (Cysteine-rich secretory protein-related) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00012816 | ||||
Corresponding_transcript | Y43F8B.5.1 | |||||
Corresponding_protein | CE21890 | |||||
Corresponding_PCR_product | cenix:189-g5 | |||||
mv_Y43F8B.5 | ||||||
sjj_Y116F11A.gg | ||||||
sjj_Y43F8B.5 | ||||||
smd_Y116F11A.gg | ||||||
Corresponding_oligo_set (14) | ||||||
RNAi_result | WBRNAi00020557 | |||||
WBRNAi00019948 | ||||||
WBRNAi00056514 | ||||||
Microarray_results (17) | ||||||
Brief_identification | SCP domain-containing protein | Accession_evidence | UniProt | TR:Q9XWX3 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |