WormBase Tree Display for CDS: Y39A3A.2
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Y39A3A.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y39A3A | |||
Structure | Source_exons | 1 | 162 | |||
210 | 308 | |||||
356 | 680 | |||||
733 | 941 | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q9N522 | ||
UniProt | UniProtAcc | Q9N522 | ||||
UniProt_GCRP | UniProtAcc | Q9N522 | ||||
AlphaFold | entry | Q9N522 | ||||
NCBI_protein | GI_number | GI:351064559 | ||||
TREEFAM | TREEFAM_ID | TF322162 | ||||
Protein_id | CHROMOSOME_III | CCD73005 | 1 | |||
DB_remark | contains similarity to Pfam domain PF08277 (PAN-like domain); contains similarity to Interpro domain IPR006583 (PAN-3 domain) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00021433 | ||||
Corresponding_transcript | Y39A3A.2.1 | |||||
Corresponding_protein | CE21639 | |||||
Corresponding_PCR_product | TH:328H10 | |||||
cenix:328-h10 | ||||||
mv_Y39A3A.2 | ||||||
sjj_Y39A3A.2 | ||||||
Corresponding_oligo_set (11) | ||||||
Matching_cDNA | OSTF048B10_1 | Inferred_automatically | transcript_builder.pl | |||
FR830067 | Inferred_automatically | transcript_builder.pl | ||||
RNAi_result | WBRNAi00108533 | |||||
WBRNAi00056132 | ||||||
WBRNAi00006658 | ||||||
WBRNAi00020355 | ||||||
WBRNAi00036896 | ||||||
Microarray_results (12) | ||||||
Brief_identification | PAN-3 domain-containing protein | Accession_evidence | UniProt | TR:Q9N522 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |