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WormBase Tree Display for CDS: Y25C1A.13

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Name Class

Y25C1A.13EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceY25C1A
StructureSource_exons1167
269488
548664
13411730
DB_infoDatabaseTrEMBLUniProtAccQ9TYL2
UniProtUniProtAccQ9TYL2
UniProt_GCRPUniProtAccQ9TYL2
AlphaFoldentryQ9TYL2
NCBI_proteinGI_numberGI:351018086
TREEFAMTREEFAM_IDTF314317
Protein_idCHROMOSOME_IICCD619921
DB_remarkcontains similarity to Pfam domain PF00378 (Enoyl-CoA hydratase/isomerase); contains similarity to Interpro domains IPR014748 (Enoyl-CoA hydratase, C-terminal), IPR001753 (Enoyl-CoA hydratase/isomerase), IPR029045 (ClpP/crotonase-like domain superfamily), IPR045002 (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase Ech1-like)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00021296
Corresponding_transcriptY25C1A.13.1
Corresponding_proteinCE21481
Corresponding_PCR_product[pmid12181365]:ECH1
cenix:151-b5
mv_Y25C1A.13
sjj_Y25C1A.13
Corresponding_oligo_set (17)
Matching_cDNA (44)
RNAi_resultWBRNAi00055734
WBRNAi00007231
WBRNAi00036737
WBRNAi00090565
WBRNAi00020137
Microarray_results (19)
Brief_identificationDelta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrialAccession_evidenceUniProtTR:Q9TYL2
RNASeq_FPKM (74)
Methodcurated