WormBase Tree Display for CDS: Y25C1A.13
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Y25C1A.13 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y25C1A | |||
Structure | Source_exons | 1 | 167 | |||
269 | 488 | |||||
548 | 664 | |||||
1341 | 1730 | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q9TYL2 | ||
UniProt | UniProtAcc | Q9TYL2 | ||||
UniProt_GCRP | UniProtAcc | Q9TYL2 | ||||
AlphaFold | entry | Q9TYL2 | ||||
NCBI_protein | GI_number | GI:351018086 | ||||
TREEFAM | TREEFAM_ID | TF314317 | ||||
Protein_id | CHROMOSOME_II | CCD61992 | 1 | |||
DB_remark | contains similarity to Pfam domain PF00378 (Enoyl-CoA hydratase/isomerase); contains similarity to Interpro domains IPR014748 (Enoyl-CoA hydratase, C-terminal), IPR001753 (Enoyl-CoA hydratase/isomerase), IPR029045 (ClpP/crotonase-like domain superfamily), IPR045002 (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase Ech1-like) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00021296 | ||||
Corresponding_transcript | Y25C1A.13.1 | |||||
Corresponding_protein | CE21481 | |||||
Corresponding_PCR_product | [pmid12181365]:ECH1 | |||||
cenix:151-b5 | ||||||
mv_Y25C1A.13 | ||||||
sjj_Y25C1A.13 | ||||||
Corresponding_oligo_set (17) | ||||||
Matching_cDNA (44) | ||||||
RNAi_result | WBRNAi00055734 | |||||
WBRNAi00007231 | ||||||
WBRNAi00036737 | ||||||
WBRNAi00090565 | ||||||
WBRNAi00020137 | ||||||
Microarray_results (19) | ||||||
Brief_identification | Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial | Accession_evidence | UniProt | TR:Q9TYL2 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |