WormBase Tree Display for CDS: Y110A2AL.5
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| Y110A2AL.5 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y110A2AL | |||
| Structure | Source_exons | 1 | 595 | |||
| 649 | 716 | |||||
| 758 | 835 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q9N4A0 | ||
| UniProt | UniProtAcc | Q9N4A0 | ||||
| UniProt_GCRP | UniProtAcc | Q9N4A0 | ||||
| AlphaFold | entry | Q9N4A0 | ||||
| NCBI_protein | GI_number | GI:351064531 | ||||
| TREEFAM | TREEFAM_ID | TF322199 | ||||
| Protein_id | CHROMOSOME_II | CCD72975 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF08277 (PAN-like domain); contains similarity to Interpro domains IPR006583 (PAN-3 domain), IPR016187 (C-type lectin fold) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | WBGene00022442 | ||||
| Corresponding_transcript | Y110A2AL.5.1 | |||||
| Corresponding_protein | CE25193 | |||||
| Corresponding_PCR_product | cenix:110-d3 | |||||
| mv_Y110A2AL.5 | ||||||
| sjj_Y110A2A_54.j | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA | OSTR101E2_1 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | WBRNAi00055302 | |||||
| WBRNAi00019865 | ||||||
| WBRNAi00036541 | ||||||
| Microarray_results (18) | ||||||
| Brief_identification | PAN-3 domain-containing protein | Accession_evidence | UniProt | TR:Q9N4A0 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
