WormBase Tree Display for CDS: W09D10.3
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W09D10.3 | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | W09D10 | ||
Structure | Source_exons | 1 | 70 | ||
119 | 319 | ||||
378 | 628 | ||||
DB_info | Database | TrEMBL | UniProtAcc | O18180 | |
UniProt | UniProtAcc | O18180 | |||
UniProt_GCRP | UniProtAcc | O18180 | |||
AlphaFold | entry | O18180 | |||
NCBI_protein | GI_number | GI:3880624 | |||
TREEFAM | TREEFAM_ID | TF105997 | |||
Protein_id | CHROMOSOME_III | CAB07857 | 1 | ||
DB_remark | MRPL-12 protein; contains similarity to Pfam domains PF00542 (Ribosomal protein L7/L12 C-terminal domain), PF16320 (Ribosomal protein L7/L12 dimerisation domain); contains similarity to Interpro domains IPR036235 (Large ribosomal subunit protein bL12, oligomerization domain superfamily), IPR013823 (Large ribosomal subunit protein bL12, C-terminal), IPR000206 (Large ribosomal subunit protein bL12), IPR014719 (Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like), IPR008932 (Large ribosomal subunit protein bL12, oligomerization) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Visible | Gene | WBGene00012361 | |||
Corresponding_transcript | W09D10.3.1 | ||||
Corresponding_protein | CE16564 | ||||
Corresponding_PCR_product | TH:325C2 | ||||
TH:340C9 | |||||
cenix:325-c2 | |||||
cenix:340-c9 | |||||
mv_W09D10.3 | |||||
sjj_W09D10.3 | |||||
Corresponding_oligo_set (19) | |||||
Matching_cDNA (50) | |||||
RNAi_result | WBRNAi00055036 | ||||
WBRNAi00002719 | |||||
WBRNAi00036403 | |||||
WBRNAi00002631 | |||||
WBRNAi00009274 | |||||
WBRNAi00055037 | |||||
WBRNAi00026529 | |||||
WBRNAi00078569 | |||||
WBRNAi00078632 | |||||
WBRNAi00088541 | |||||
Microarray_results (20) | |||||
RNASeq_FPKM (74) | |||||
Associated_feature | WBsf002825 | ||||
Method | curated |