WormBase Tree Display for CDS: T28F3.5b
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| T28F3.5b | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T28F3 | ||
| Structure | Source_exons (18) | ||||
| DB_info | Database | KEGG | KEGG_id | 6.4.1.2 | |
| TrEMBL | UniProtAcc | C1P655 | |||
| UniProt | UniProtAcc | C1P655 | |||
| AlphaFold | entry | C1P655 | |||
| NCBI_protein | GI_number | GI:225878037 | |||
| Protein_id | CHROMOSOME_IV | CAX65073 | 1 | ||
| DB_remark | contains similarity to Pfam domains PF00289 (Biotin carboxylase, N-terminal domain), PF00364 (Biotin-requiring enzyme), PF01039 (Carboxyl transferase domain), PF02785 (Biotin carboxylase C-terminal domain), PF02786 (Carbamoyl-phosphate synthase L chain, ATP binding domain), PF08326 (Acetyl-CoA carboxylase, central region); contains similarity to Interpro domains IPR000089 (Biotin/lipoyl attachment), IPR005482 (Biotin carboxylase, C-terminal), IPR011053 (Single hybrid motif), IPR013815 (ATP-grasp fold, subdomain 1), IPR013537 (Acetyl-CoA carboxylase, central domain), IPR049076 (Acetyl-CoA carboxylase), IPR029045 (ClpP/crotonase-like domain superfamily), IPR005481 (Biotin carboxylase-like, N-terminal domain), IPR016185 (Pre-ATP-grasp domain superfamily), IPR034733 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta), IPR005479 (Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain), IPR011054 (Rudiment single hybrid motif) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform | From_analysis | RNASeq_Hillier_elegans | |||
| Visible (12) | |||||
| Method | curated |
