WormBase Tree Display for CDS: T23B12.1
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| T23B12.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T23B12 | |||
| Structure | Source_exons | 1 | 168 | |||
| 218 | 433 | |||||
| 485 | 544 | |||||
| 593 | 763 | |||||
| 814 | 903 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | O17006 | ||
| UniProt | UniProtAcc | O17006 | ||||
| UniProt_GCRP | UniProtAcc | O17006 | ||||
| AlphaFold | entry | O17006 | ||||
| NCBI_protein | GI_number | GI:373220277 | ||||
| TREEFAM | TREEFAM_ID | TF317416 | ||||
| Protein_id | CHROMOSOME_V | CCD72913 | 1 | |||
| DB_remark | PHF-30 protein; contains similarity to Pfam domain PF00628 (PHD-finger); contains similarity to Interpro domains IPR011011 (Zinc finger, FYVE/PHD-type), IPR019787 (Zinc finger, PHD-finger), IPR001965 (Zinc finger, PHD-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00020716 | ||||
| Corresponding_transcript | T23B12.1.1 | |||||
| Corresponding_protein | CE14026 | |||||
| Corresponding_PCR_product | cenix:128-f4 | |||||
| mv_T23B12.1 | ||||||
| sjj_T23B12.1 | ||||||
| Corresponding_oligo_set (18) | ||||||
| Matching_cDNA (38) | ||||||
| RNAi_result | WBRNAi00062379 | |||||
| WBRNAi00069232 | ||||||
| WBRNAi00053881 | ||||||
| WBRNAi00113509 | ||||||
| WBRNAi00019054 | ||||||
| WBRNAi00035833 | ||||||
| Microarray_results (20) | ||||||
| Brief_identification | PHD-type domain-containing protein | Accession_evidence | UniProt | TR:O17006 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf014685 | |||||
| Method | curated |
