WormBase Tree Display for CDS: T13H5.4
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T13H5.4 | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | T13H5 | ||
Structure | Source_exons | 1 | 144 | ||
194 | 352 | ||||
420 | 946 | ||||
998 | 1259 | ||||
1319 | 1504 | ||||
1550 | 1774 | ||||
DB_info | Database | TrEMBL | UniProtAcc | Q22469 | |
UniProt | UniProtAcc | Q22469 | |||
UniProt_GCRP | UniProtAcc | Q22469 | |||
AlphaFold | entry | Q22469 | |||
NCBI_protein | GI_number | GI:5824606 | |||
TREEFAM | TREEFAM_ID | TF315227 | |||
Protein_id | CHROMOSOME_II | CAA91420 | 2 | ||
DB_remark | PRP-9 protein; contains similarity to Pfam domains PF11931 (SF3a60/Prp9 C-terminal), PF12108 (Splicing factor SF3a60 binding domain), PF13297 (Replication stress response SDE2 C-terminal), PF16837 (Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9); contains similarity to Interpro domains IPR031774 (SF3A3 domain), IPR025086 (SDE2-like, C-terminal domain), IPR024598 (Splicing factor SF3a60 /Prp9 subunit, C-terminal), IPR021966 (Splicing factor SF3a60 binding domain) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Visible (11) | |||||
Associated_feature | WBsf009485 | ||||
Method | curated |