WormBase Tree Display for CDS: T10E10.7
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T10E10.7 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | T10E10 | |||
Structure | Source_exons | 1 | 924 | |||
DB_info | Database | TrEMBL | UniProtAcc | Q86NE2 | ||
UniProt | UniProtAcc | Q86NE2 | ||||
UniProt_GCRP | UniProtAcc | Q86NE2 | ||||
AlphaFold | entry | Q86NE2 | ||||
NCBI_protein | GI_number | GI:351020788 | ||||
Protein_id | CHROMOSOME_X | CCD62758 | 1 | |||
DB_remark | COL-171 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00000744 | ||||
Corresponding_transcript | T10E10.7.1 | |||||
Corresponding_protein | CE02870 | |||||
Corresponding_PCR_product | mv_T10E10.a | |||||
mv_T10E10.h | ||||||
sjj2_T10E10.7 | ||||||
sjj_T10E10.1 | ||||||
Corresponding_oligo_set (17) | ||||||
Microarray_results (17) | ||||||
Brief_identification | Nematode cuticle collagen N-terminal domain-containing protein | Accession_evidence | UniProt | TR:Q86NE2 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 12 Feb 2003 00:00:00 | WBPerson615 | ||||
Remark | [20030212 js] this gene was created based on an analysis of collogens by Jim Kramer and Danielle Thierry-Mieg | Curator_confirmed | WBPerson615 | |||
Method | curated |