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WormBase Tree Display for CDS: T10E10.7

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Name Class

T10E10.7EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceT10E10
StructureSource_exons1924
DB_infoDatabaseTrEMBLUniProtAccQ86NE2
UniProtUniProtAccQ86NE2
UniProt_GCRPUniProtAccQ86NE2
AlphaFoldentryQ86NE2
NCBI_proteinGI_numberGI:351020788
Protein_idCHROMOSOME_XCCD627581
DB_remarkCOL-171 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00000744
Corresponding_transcriptT10E10.7.1
Corresponding_proteinCE02870
Corresponding_PCR_productmv_T10E10.a
mv_T10E10.h
sjj2_T10E10.7
sjj_T10E10.1
Corresponding_oligo_set (17)
Microarray_results (17)
Brief_identificationNematode cuticle collagen N-terminal domain-containing proteinAccession_evidenceUniProtTR:Q86NE2
RNASeq_FPKM (74)
Last_reviewed12 Feb 2003 00:00:00WBPerson615
Remark[20030212 js] this gene was created based on an analysis of collogens by Jim Kramer and Danielle Thierry-MiegCurator_confirmedWBPerson615
Methodcurated