WormBase Tree Display for CDS: T10B9.3
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| T10B9.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T10B9 | |||
| Structure | Source_exons | 1 | 180 | |||
| 287 | 618 | |||||
| 666 | 765 | |||||
| 809 | 1365 | |||||
| 1430 | 1573 | |||||
| 1619 | 1862 | |||||
| DB_info | Database | KEGG | KEGG_id | 1.14.-.- | ||
| SwissProt | UniProtAcc | Q27515 | ||||
| UniProt | UniProtAcc | Q27515 | ||||
| UniProt_GCRP | UniProtAcc | Q27515 | ||||
| AlphaFold | entry | Q27515 | ||||
| NCBI_protein | GI_number | GI:3879661 | ||||
| TREEFAM | TREEFAM_ID | TF352036 | ||||
| Protein_id | CHROMOSOME_II | CAA88605 | 1 | |||
| DB_remark | CYP-13A6 protein; contains similarity to Pfam domain PF00067 (Cytochrome P450); contains similarity to Interpro domains IPR001128 (Cytochrome P450), IPR002401 (Cytochrome P450, E-class, group I), IPR036396 (Cytochrome P450 superfamily) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00011673 | ||||
| Corresponding_transcript | T10B9.3.1 | |||||
| Corresponding_protein | CE01657 | |||||
| Corresponding_PCR_product | cenix:26-e1 | |||||
| mv_T10B9.3 | ||||||
| sjj_T10B9.3 | ||||||
| Corresponding_oligo_set (18) | ||||||
| Matching_cDNA | L2_Nanopore_Roach_102817 | Inferred_automatically | transcript_builder.pl | |||
| L3_Nanopore_Roach_53178 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_239438 | Inferred_automatically | transcript_builder.pl | ||||
| yk1075h03.5 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_50532 | Inferred_automatically | transcript_builder.pl | ||||
| OSTF110A1_1 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_149507 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG3327|c2_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG3327|c1_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| FN891884 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00070121 | |||||
| WBRNAi00018526 | ||||||
| WBRNAi00035422 | ||||||
| WBRNAi00092624 | ||||||
| WBRNAi00103521 | ||||||
| WBRNAi00053017 | ||||||
| WBRNAi00114811 | ||||||
| Microarray_results (18) | ||||||
| Brief_identification | Putative cytochrome P450 CYP13A6 | Accession_evidence | UniProt | SP:Q27515 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
