WormBase Tree Display for CDS: T05C12.11a
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| T05C12.11a | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T05C12 | ||
| Structure | Source_exons | 1 | 42 | ||
| 392 | 489 | ||||
| 855 | 1032 | ||||
| 1132 | 1677 | ||||
| DB_info | Database | TrEMBL | UniProtAcc | A0A2C9C345 | |
| UniProt | UniProtAcc | A0A2C9C345 | |||
| AlphaFold | entry | A0A2C9C345 | |||
| NCBI_protein | GI_number | GI:1249576675 | |||
| Protein_id | CHROMOSOME_II | SOF58772 | 1 | ||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform | Curator_confirmed | WBPerson1983 | |||
| Visible | Gene | WBGene00011473 | |||
| Corresponding_transcript | T05C12.11a.1 | ||||
| Corresponding_protein | CE52317 | ||||
| Corresponding_PCR_product | sjj2_T05C12.11 | ||||
| smd_F10B5.7 | |||||
| Corresponding_oligo_set (12) | |||||
| Matching_cDNA | L4_Nanopore_Roach_60475 | Inferred_automatically | transcript_builder.pl | ||
| L2_Nanopore_Roach_64498 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Roach_63825 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Li_307945 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Li_260727 | Inferred_automatically | transcript_builder.pl | |||
| Microarray_results (13) | |||||
| RNASeq_FPKM (74) | |||||
| Last_reviewed | 31 Aug 2017 09:39:51 | WBPerson1983 | |||
| Remark | [030722 dl] Predicted by Avril Coghlan's comparative analysis of elegans and briggsae. This prediction is supported by briggsae similarity | Curator_confirmed | WBPerson1846 | ||
| [170831 pad] This CDS has been updated based on the RNAseq data. | Curator_confirmed | WBPerson1983 | |||
| From_analysis | RNASeq | ||||
| Method | curated |
