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WormBase Tree Display for CDS: SRAE_2000321800

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Name Class

SRAE_2000321800SMapS_parentSequenceSRAE_chr2
StructureSource_exons1588
6401662
DB_infoDatabaseUniProtUniProtAccA0A090LFM0
UniProtIdA0A090LFM0_STRRB
DB_remarkcontains similarity to Pfam domain PF00118 (TCP-1/cpn60 chaperonin family); contains similarity to Interpro domains IPR027410 (TCP-1-like chaperonin intermediate domain superfamily), IPR012722 (T-complex protein 1, zeta subunit), IPR027413 (GroEL-like equatorial domain superfamily), IPR017998 (Chaperone tailless complex polypeptide 1 (TCP-1)), IPR027409 (GroEL-like apical domain superfamily), IPR002423 (Chaperonin Cpn60/GroEL/TCP-1 family)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusConfirmed
VisibleGeneWBGene00263439
Corresponding_transcriptSRAE_2000321800.1
SRAE_2000321800.2
Corresponding_proteinSRP04380
Matching_cDNA (19)
Brief_identificationT-complex protein 1 subunit zeta-2
RNASeq_FPKMWBls:0000678252.94From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
WBls:0000680131.536From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:000068237.0502From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated