WormBase Tree Display for CDS: R107.8

R107.8 Evidence: Inferred_automatically: make_isoforms.pl
  SMap: S_parent: Sequence: R107
  Structure: Source_exons: 1 149
      1670 1788
      3404 3460
      4476 4666
      6119 7235
      7540 7672
      7719 7847
      7896 9819
      10130 10477
      10865 10987
  DB_info: Database: SwissProt UniProtAcc P14585
      UniProt UniProtAcc P14585
      UniProt_GCRP UniProtAcc P14585
      AlphaFold entry P14585
      NCBI_protein GI_number GI:3879039
      TREEFAM TREEFAM_ID TF351641
    Protein_id: CHROMOSOME_III CAA78474 1
    DB_remark: LIN-12 protein; contains similarity to Pfam domains PF00008 (EGF-like domain), PF00066 (LNR domain), PF06816 (NOTCH protein), PF07645 (Calcium-binding EGF domain), PF07684 (NOTCH protein), PF07974 (EGF-like domain), PF12661 (Human growth factor-like EGF), PF12796 (Ankyrin repeats (3 copies)); contains similarity to Interpro domains IPR011656 (Notch, NODP domain), IPR002110 (Ankyrin repeat), IPR001881 (EGF-like calcium-binding domain), IPR009030 (Growth factor receptor cysteine-rich domain superfamily), IPR000800 (Notch domain), IPR035993 (Notch-like domain superfamily), IPR000742 (EGF-like domain), IPR049883 (NOTCH1 EGF-like calcium-binding domain), IPR036770 (Ankyrin repeat-containing domain superfamily), IPR010660 (Notch, NOD domain), IPR013032 (EGF-like, conserved site), IPR013111 (EGF-like domain, extracellular)
  Origin: From_laboratory: HX
    Species: Caenorhabditis elegans
  Properties: Coding: CDS
      Prediction_status: Confirmed
  Visible: Gene: WBGene00003001
    Corresponding_transcript: R107.8.1
    Corresponding_protein: CE00274
    Corresponding_PCR_product: TH:300D11
      cenix:300-d11
      mv_AAA70191
      sjj_R107.8
    Corresponding_oligo_set (18)
    Matching_cDNA (15)
    RNAi_result (26)
    Microarray_results (19)
    Brief_identification: lin-12/Notch intracellular domain Accession_evidence: UniProt SP:P14585
    RNASeq_FPKM (74)
  Method: curated