WormBase Tree Display for CDS: R07B1.5
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| R07B1.5 | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | R07B1 | ||
| Structure | Source_exons | 1 | 178 | ||
| 473 | 531 | ||||
| 649 | 750 | ||||
| 1136 | 1279 | ||||
| DB_info | Database | SwissProt | UniProtAcc | Q09419 | |
| UniProt | UniProtAcc | Q09419 | |||
| UniProt_GCRP | UniProtAcc | Q09419 | |||
| AlphaFold | entry | Q09419 | |||
| NCBI_protein | GI_number | GI:3878916 | |||
| Protein_id | CHROMOSOME_X | CAA88542 | 1 | ||
| DB_remark | contains similarity to Pfam domain PF01681 (C6 domain); contains similarity to Interpro domain IPR002601 (C6 domain) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Visible | Gene | WBGene00011077 | |||
| Corresponding_transcript | R07B1.5.1 | ||||
| R07B1.5.2 | |||||
| R07B1.5.3 | |||||
| Corresponding_protein | CE01631 | ||||
| Corresponding_PCR_product | cenix:131-d7 | ||||
| mv_R07B1.5 | |||||
| sjj_R07B1.5 | |||||
| Corresponding_oligo_set (14) | |||||
| Matching_cDNA | L4_Nanopore_Roach_28483 | Inferred_automatically | transcript_builder.pl | ||
| L3_Nanopore_Roach_73418 | Inferred_automatically | transcript_builder.pl | |||
| EM_Nanopore_Li_314579 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Li_136798 | Inferred_automatically | transcript_builder.pl | |||
| EM_Nanopore_Li_13310 | Inferred_automatically | transcript_builder.pl | |||
| FM864560 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Li_273518 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Li_10881 | Inferred_automatically | transcript_builder.pl | |||
| elegans_PE_SS_GG4921|c4_g1_i1 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | WBRNAi00017504 | ||||
| WBRNAi00051414 | |||||
| Microarray_results (15) | |||||
| RNASeq_FPKM (74) | |||||
| Method | curated |
