WormBase Tree Display for CDS: PPA46945
expand all nodes | collapse all nodes | view schema
PPA46945 | SMap | S_parent | Sequence | PPA_ChrI | |
---|---|---|---|---|---|
Structure | Source_exons | 2 | 176 | ||
597 | 673 | ||||
794 | 920 | ||||
1041 | 1156 | ||||
1381 | 1503 | ||||
DB_info | DB_remark | PPA-PINN-1 protein; contains similarity to Pfam domains PF00397 (WW domain), PF00639 (PPIC-type PPIASE domain); contains similarity to Interpro domains IPR000297 (Peptidyl-prolyl cis-trans isomerase, PpiC-type), IPR001202 (WW domain), IPR036020 (WW domain superfamily) | |||
Origin | From_laboratory | RS | |||
Species | Pristionchus pacificus | ||||
Properties | Coding | CDS | |||
CDS_predicted_by | pristionchus.org | ||||
Prediction_status | Partially_confirmed | ||||
Start_not_found | 1 | ||||
Visible | Gene | WBGene00304724 | |||
Corresponding_transcript | PPA46945.1 | ||||
Corresponding_protein | PP74575 | ||||
Corresponding_oligo_set | GPL14372_Probes_68882 | ||||
GPL14372_Probes_68883 | |||||
GPL14372_Probes_68884 | |||||
GPL14372_Probes_68885 | |||||
Matching_cDNA | AA193742 | Inferred_automatically | transcript_builder.pl | ||
FG100522 | Inferred_automatically | transcript_builder.pl | |||
CN657733 | Inferred_automatically | transcript_builder.pl | |||
FG103260 | Inferred_automatically | transcript_builder.pl | |||
CN657467 | Inferred_automatically | transcript_builder.pl | |||
CN657143 | Inferred_automatically | transcript_builder.pl | |||
CN657859 | Inferred_automatically | transcript_builder.pl | |||
Microarray_results | GPL14372_Probes_68882 | ||||
GPL14372_Probes_68883 | |||||
GPL14372_Probes_68884 | |||||
GPL14372_Probes_68885 | |||||
RNASeq_FPKM (2) | |||||
Remark | [190221 mh6] imported from pristionchus.org | Curator_confirmed | WBPerson18244 | ||
Method | curated |