WormBase Tree Display for CDS: PPA45223
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PPA45223 | SMap | S_parent | Sequence | PPA_ChrII | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 76 | ||
138 | 202 | ||||
416 | 501 | ||||
740 | 809 | ||||
998 | 1048 | ||||
1256 | 1365 | ||||
1436 | 1507 | ||||
1552 | 1675 | ||||
DB_info | Database | pristionchus.org | cds | gene-UMS-S296-6.61 | |
DB_remark | contains similarity to Pfam domain PF13521 (AAA domain); contains similarity to Interpro domains IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR038727 (NadR/Ttd14, AAA domain) | ||||
Origin | From_laboratory | RS | |||
Species | Pristionchus pacificus | ||||
Properties | Coding | CDS | |||
CDS_predicted_by | pristionchus.org | ||||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | WBGene00283592 | |||
Corresponding_transcript | PPA45223.1 | ||||
Corresponding_protein | PP29278 | ||||
Corresponding_oligo_set | GPL14372_Probes_82574 | ||||
GPL14372_Probes_82575 | |||||
GPL14372_Probes_82576 | |||||
GPL14372_Probes_82577 | |||||
Matching_cDNA | FG098269 | Inferred_automatically | transcript_builder.pl | ||
Microarray_results (4) | |||||
RNASeq_FPKM (2) | |||||
Method | curated |