Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: PPA41642

expand all nodes | collapse all nodes | view schema

Name Class

PPA41642SMapS_parentSequencePPA_ChrIV
StructureSource_exons (28)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2840-82.41
DB_remarkcontains similarity to Pfam domains PF00201 (UDP-glucoronosyl and UDP-glucosyl transferase), PF10317 (Serpentine type 7TM GPCR chemoreceptor Srd), PF10327 (Serpentine type 7TM GPCR chemoreceptor Sri); contains similarity to Interpro domains IPR019429 (7TM GPCR, serpentine chemoreceptor class i (Sri)), IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase), IPR019421 (7TM GPCR, serpentine receptor class d (Srd))
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00280011
Corresponding_transcriptPPA41642.1
Corresponding_proteinPP58055
Corresponding_oligo_setGPL14372_Probes_22006
GPL14372_Probes_89682
GPL14372_Probes_89683
GPL14372_Probes_89685
Microarray_resultsGPL14372_Probes_22006
GPL14372_Probes_89682
GPL14372_Probes_89683
GPL14372_Probes_89685
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated