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WormBase Tree Display for CDS: PPA20452

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Name Class

PPA20452EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequencePPA_ChrIII
StructureSource_exons (22)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S341-0.39
DB_remarkcontains similarity to Pfam domains PF00757 (Furin-like cysteine rich region), PF01030 (Receptor L domain); contains similarity to Interpro domains IPR006212 (Furin-like repeat), IPR036941 (Receptor L-domain superfamily), IPR009030 (Growth factor receptor cysteine-rich domain superfamily), IPR013783 (Immunoglobulin-like fold), IPR000494 (Receptor L-domain), IPR006211 (Furin-like cysteine-rich domain), IPR036116 (Fibronectin type III superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00110006
Corresponding_transcriptPPA20452.1
Corresponding_proteinPP63659
Corresponding_oligo_setGPL14372_Probes_66718
GPL14372_Probes_66719
GPL14372_Probes_66720
Microarray_resultsGPL14372_Probes_66718
GPL14372_Probes_66719
GPL14372_Probes_66720
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001015.93779From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S341-0.39Curator_confirmedWBPerson4055
Methodcurated