Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: PPA17522

expand all nodes | collapse all nodes | view schema

Name Class

PPA17522SMapS_parentSequencePPA_ChrI
StructureSource_exons1186
285437
508631
7001067
DB_infoDatabasepristionchus.orgcdsgene-UMM-S139-16.56
DB_remarkPPA-MXL-3 protein; contains similarity to Pfam domain PF00010 (Helix-loop-helix DNA-binding domain); contains similarity to Interpro domains IPR036638 (Helix-loop-helix DNA-binding domain superfamily), IPR011598 (Myc-type, basic helix-loop-helix (bHLH) domain), IPR037933 ()
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00107076
Corresponding_transcriptPPA17522.1
Corresponding_proteinPP63811
Corresponding_oligo_setGPL14372_Probes_30738
GPL14372_Probes_30739
GPL14372_Probes_30740
Microarray_resultsGPL14372_Probes_30738
GPL14372_Probes_30739
GPL14372_Probes_30740
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S139-16.56Curator_confirmedWBPerson4055
Methodcurated