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WormBase Tree Display for CDS: PPA10288

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Name Class

PPA10288SMapS_parentSequencePPA_ChrIII
StructureSource_exons (17)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S341-5.28
DB_remarkcontains similarity to Pfam domains PF00017 (SH2 domain), PF07714 (Protein tyrosine and serine/threonine kinase); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR036860 (SH2 domain superfamily), IPR001245 (Serine-threonine/tyrosine-protein kinase, catalytic domain), IPR000980 (SH2 domain), IPR020635 (Tyrosine-protein kinase, catalytic domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00099842
Corresponding_transcriptPPA10288.1
Corresponding_proteinPP52075
Corresponding_oligo_setGPL14372_Probes_17111
GPL14372_Probes_17112
GPL14372_Probes_17113
Microarray_resultsGPL14372_Probes_17111
GPL14372_Probes_17112
GPL14372_Probes_17113
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001018.09044From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S341-5.28Curator_confirmedWBPerson4055
Methodcurated