WormBase Tree Display for CDS: PPA05096
expand all nodes | collapse all nodes | view schema
PPA05096 | SMap | S_parent | Sequence | PPA_ChrI | |
---|---|---|---|---|---|
Structure | Source_exons (73) | ||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-28.47 | |
TREEFAM | TREEFAM_ID | TF336753 | |||
DB_remark | PPA-MYO-3 protein; contains similarity to Pfam domains PF00063 (Myosin head (motor domain)), PF01576 (Myosin tail), PF02736 (Myosin N-terminal SH3-like domain); contains similarity to Interpro domains IPR004009 (Myosin, N-terminal, SH3-like), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR002928 (Myosin tail), IPR027401 (), IPR001609 (Myosin head, motor domain) | ||||
Origin | From_laboratory | RS | |||
Species | Pristionchus pacificus | ||||
Properties | Coding | CDS | |||
CDS_predicted_by | pristionchus.org | ||||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | WBGene00094650 | |||
Corresponding_transcript | PPA05096.1 | ||||
Corresponding_protein | PP68247 | ||||
Corresponding_oligo_set | GPL14372_Probes_18309 | ||||
GPL14372_Probes_18311 | |||||
GPL14372_Probes_18312 | |||||
GPL14372_Probes_69356 | |||||
GPL14372_Probes_69360 | |||||
Microarray_results | GPL14372_Probes_18309 | ||||
GPL14372_Probes_18311 | |||||
GPL14372_Probes_18312 | |||||
GPL14372_Probes_69356 | |||||
GPL14372_Probes_69360 | |||||
RNASeq_FPKM (2) | |||||
Remark | [171116 mh6] renamed from gene-UMM-S2844-28.47 | Curator_confirmed | WBPerson4055 | ||
Method | curated |