WormBase Tree Display for CDS: PPA03201
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PPA03201 | SMap | S_parent | Sequence | PPA_pbcontig410 | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 64 | |||
202 | 251 | |||||
424 | 525 | |||||
678 | 754 | |||||
862 | 923 | |||||
974 | 1030 | |||||
1150 | 1223 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S410-0.17 | ||
DB_remark | contains similarity to Pfam domain PF00059 (Lectin C-type domain); contains similarity to Interpro domains IPR016186 (C-type lectin-like/link domain superfamily), IPR001304 (C-type lectin-like), IPR016187 (C-type lectin fold) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00092755 | ||||
Corresponding_transcript | PPA03201.1 | |||||
Corresponding_protein | PP35227 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 114.467 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S410-0.17 | Curator_confirmed | WBPerson4055 | |||
Method | curated |