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WormBase Tree Display for CDS: OVOC7

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Name Class

OVOC7EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OM1b_1
StructureSource_exons (12)
DB_infoDB_remarkcontains similarity to Pfam domains PF00017 (SH2 domain), PF07714 (Protein tyrosine and serine/threonine kinase); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR036860 (SH2 domain superfamily), IPR001245 (Serine-threonine/tyrosine-protein kinase, catalytic domain), IPR000980 (SH2 domain), IPR020635 (Tyrosine-protein kinase, catalytic domain)
OriginFrom_laboratoryMBM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00236816
Corresponding_transcriptOVOC7.1
OVOC7.2
Corresponding_proteinOVP13067
Matching_cDNAovolvulus_GG645|c10_g2_i5Inferred_automaticallytranscript_builder.pl
ovolvulus_GG645|c10_g2_i6Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:0000104 (15)
WBls:00001070.018391From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001080.013151From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
0.038151From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
0.040087From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:00006640.251087From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
1.43333From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
Remark[140304 es9] Splice sites of OVOC7 gene model corrected using RNA-Seq.Curator_confirmedWBPerson2062
Methodcurated