WormBase Tree Display for CDS: OVOC6392
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OVOC6392 | SMap | S_parent | Sequence | OVOC_OM2_101 | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 144 | |||
416 | 598 | |||||
783 | 884 | |||||
1129 | 1200 | |||||
DB_info | DB_remark | OVO-UNC-60 protein; contains similarity to Pfam domain PF00241 (Cofilin/tropomyosin-type actin-binding protein); contains similarity to Interpro domains IPR002108 (Actin-depolymerising factor homology domain), IPR029006 (ADF-H/Gelsolin-like domain superfamily), IPR017904 (ADF/Cofilin) | ||||
Origin | From_laboratory | MGM | ||||
Species | Onchocerca volvulus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00243201 | ||||
Corresponding_transcript | OVOC6392.1 | |||||
Corresponding_protein | OVP10835 | |||||
Brief_identification | Actin-depolymerizing factor 1 homolog | Person_evidence | WBPerson2973 | |||
RNASeq_FPKM | WBls:0000104 (15) | |||||
WBls:0000107 | 58.2597 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 81.7194 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | |||
83.3561 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
92.0911 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | ||||
WBls:0000664 | 121.766 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
72.7483 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||
Method | curated |