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WormBase Tree Display for CDS: OVOC6028

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Name Class

OVOC6028EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OM2_85
StructureSource_exons1176
9641119
15951720
21162258
24542587
28862980
35753674
38973991
42464349
46154778
DB_infoDB_remarkcontains similarity to Pfam domain PF06102 (rRNA biogenesis protein RRP36); contains similarity to Interpro domain IPR009292 (rRNA biogenesis protein RRP36)
OriginFrom_laboratoryMBM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00242837
Corresponding_transcriptOVOC6028.1
OVOC6028.2
Corresponding_proteinOVP14004
Matching_cDNAovolvulus_GG1423|c66_g2_i7Inferred_automaticallytranscript_builder.pl
ovolvulus_GG1423|c66_g2_i8Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:0000104 (15)
WBls:00001073.95314From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010810.8924From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
13.0675From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
3.66794From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:000066417.5216From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
24.9998From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
Remark[140512 es9] Splice sites of OVOC6028 gene model corrected using RNA-Seq, protein evidence and SL1 data.Curator_confirmedWBPerson2062
Methodcurated