WormBase Tree Display for CDS: OVOC5996

OVOC5996 Evidence: Curator_confirmed: WBPerson2062
  SMap: S_parent: Sequence: OVOC_OM2_85
  Structure: Source_exons (12)
  DB_info: DB_remark: OVO-LGC-31 protein; contains similarity to Pfam domain PF02931 (Neurotransmitter-gated ion-channel ligand binding domain); contains similarity to Interpro domains IPR036734 (Neurotransmitter-gated ion-channel ligand-binding domain superfamily), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding domain), IPR036719 (Neurotransmitter-gated ion-channel transmembrane domain superfamily), IPR006201 (Neurotransmitter-gated ion-channel)
  Origin: From_laboratory: MBM
    Species: Onchocerca volvulus
  Properties: Coding: CDS
      Prediction_status: Confirmed
  Visible: Gene: WBGene00242805
    Corresponding_transcript: OVOC5996.1
    Corresponding_protein: OVP14514
    Matching_cDNA: ovolvulus_GG1441|c17_g1_i2 Inferred_automatically: transcript_builder.pl
    RNASeq_FPKM: WBls:0000104 (15)
      WBls:0000107 8.86441 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
      WBls:0000108 19.3685 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
        5.58269 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
        8.52765 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
      WBls:0000664 3.25116 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
        7.04811 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
    Remark: [140506 es9] Splice sites of OVOC5996 gene model corrected using RNA-Seq, protein evidence and SL1 data. Curator_confirmed: WBPerson2062
  Method: curated