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WormBase Tree Display for CDS: OVOC5993

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Name Class

OVOC5993SMapS_parentSequenceOVOC_OM2_85
StructureSource_exons1105
321543
852940
DB_infoDB_remarkOVO-SNR-1 protein; contains similarity to Pfam domain PF01423 (LSM domain); contains similarity to Interpro domains IPR001163 (Sm domain, eukaryotic/archaea-type), IPR027141 (Like-Sm (LSM) domain containing protein, LSm4/SmD1/SmD3), IPR010920 (LSM domain superfamily)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00242802
Corresponding_transcriptOVOC5993.1
Corresponding_proteinOVP02778
Matching_cDNAovolvulus_GG1441|c6_g1_i1Inferred_automaticallytranscript_builder.pl
Brief_identificationSmall nuclear ribonucleoprotein Sm D3 homologPerson_evidenceWBPerson2973
RNASeq_FPKMWBls:0000104 (15)
WBls:0000107175.738From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:0000108134.124From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
80.7249From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
95.9449From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
WBls:0000664223.149From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
316.879From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Methodcurated