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WormBase Tree Display for CDS: OVOC5992

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Name Class

OVOC5992SMapS_parentSequenceOVOC_OM2_85
StructureSource_exons (15)
DB_infoDB_remarkOVO-NPP-22 protein; contains similarity to Pfam domain PF09531 (Nucleoporin protein Ndc1-Nup); contains similarity to Interpro domain IPR019049 (Nucleoporin protein Ndc1-Nup)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00242801
Corresponding_transcriptOVOC5992.1
Corresponding_proteinOVP08187
Matching_cDNAovolvulus_GG1441|c15_g1_i3Inferred_automaticallytranscript_builder.pl
Brief_identificationNucleoporin ndc-1 homologPerson_evidenceWBPerson2973
RNASeq_FPKMWBls:0000104 (15)
WBls:00001077.09406From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010810.5689From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
29.2118From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
41.3533From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:000066433.8954From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
38.1026From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Methodcurated