WormBase Tree Display for CDS: OVOC5979
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| OVOC5979 | SMap | S_parent | Sequence | OVOC_OM2_85 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 151 | |||
| 370 | 501 | |||||
| 586 | 644 | |||||
| 967 | 1136 | |||||
| 1248 | 1320 | |||||
| 1523 | 1630 | |||||
| 2174 | 2344 | |||||
| 2718 | 2920 | |||||
| 3071 | 3186 | |||||
| 3240 | 3457 | |||||
| DB_info | DB_remark | OVO-COQ-6 protein; contains similarity to Pfam domain PF01494 (FAD binding domain); contains similarity to Interpro domains IPR036188 (FAD/NAD(P)-binding domain superfamily), IPR002938 (FAD-binding domain), IPR010971 (Ubiquinone biosynthesis hydroxylase UbiH/COQ6) | ||||
| Origin | From_laboratory | MGM | ||||
| Species | Onchocerca volvulus | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Start_not_found | 1 | |||||
| Visible | Gene | WBGene00242788 | ||||
| Corresponding_transcript | OVOC5979.1 | |||||
| Corresponding_protein | OVP12010 | |||||
| Brief_identification | Putative ubiquinone biosynthesis monooxygenase coq-6 | Person_evidence | WBPerson2973 | |||
| RNASeq_FPKM | WBls:0000104 (15) | |||||
| WBls:0000107 | 3.66598 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
| WBls:0000108 | 10.6598 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | |||
| 11.187 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
| 3.43327 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | ||||
| WBls:0000664 | 14.028 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | |||
| 17.4927 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | ||||
| Method | curated |
