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WormBase Tree Display for CDS: OVOC5975

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Name Class

OVOC5975SMapS_parentSequenceOVOC_OM2_85
StructureSource_exons (13)
DB_infoDB_remarkcontains similarity to Pfam domains PF00651 (BTB/POZ domain), PF07707 (BTB And C-terminal Kelch), PF08005 (PHR domain); contains similarity to Interpro domains IPR038648 (PHR domain superfamily), IPR000210 (BTB/POZ domain), IPR012983 (PHR), IPR011333 (SKP1/BTB/POZ domain superfamily), IPR011705 (BTB/Kelch-associated)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00242784
Corresponding_transcriptOVOC5975.1
Corresponding_proteinOVP04316
Matching_cDNAovolvulus_GG1437|c41_g1_i2Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:0000104 (15)
WBls:00001078.22716From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010822.5029From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
22.5892From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
8.8764From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:000066421.417From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
29.3007From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
Methodcurated