WormBase Tree Display for CDS: OVOC5953
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| OVOC5953 | SMap | S_parent | Sequence | OVOC_OM2_85 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (13) | |||||
| DB_info | DB_remark | OVO-STA-2 protein; contains similarity to Pfam domain PF00017 (SH2 domain); contains similarity to Interpro domains IPR036860 (SH2 domain superfamily), IPR015988 (STAT transcription factor, coiled coil), IPR001217 (Transcription factor STAT), IPR008967 (p53-like transcription factor, DNA-binding domain superfamily), IPR000980 (SH2 domain) | ||||
| Origin | From_laboratory | MGM | ||||
| Species | Onchocerca volvulus | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00242762 | ||||
| Corresponding_transcript | OVOC5953.1 | |||||
| Corresponding_protein | OVP09443 | |||||
| Brief_identification | Signal transducer and activator of transcription b homolog | Person_evidence | WBPerson2973 | |||
| RNASeq_FPKM | WBls:0000104 (15) | |||||
| WBls:0000107 | 8.46176 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
| WBls:0000108 | 17.899 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | |||
| 43.1111 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
| 8.91592 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | ||||
| WBls:0000664 | 1.03925 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | |||
| 2.06674 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | ||||
| Method | curated |
