WormBase Tree Display for CDS: OVOC4431c

OVOC4431c SMap: S_parent: Sequence: OVOC_OM2_21
  Structure: Source_exons (37)
  DB_info: DB_remark: OVO-UNC-44 protein; contains similarity to Pfam domains PF00531 (Death domain), PF00791 (ZU5 domain), PF12796 (Ankyrin repeats (3 copies)), PF13637 (Ankyrin repeats (many copies)), PF13857 (Ankyrin repeats (many copies)), PF17809 (UPA domain); contains similarity to Interpro domains IPR011029 (Death-like domain superfamily), IPR002110 (Ankyrin repeat), IPR040745 (Ankyrin, UPA domain), IPR000488 (Death domain), IPR020683 (Domain of unknown function DUF3447), IPR000906 (ZU5 domain), IPR036770 (Ankyrin repeat-containing domain superfamily)
  Origin: From_laboratory: HX
    Species: Onchocerca volvulus
  Properties: Coding: CDS
      Prediction_status: Confirmed
    Isoform: Curator_confirmed: WBPerson4055
  Visible: Gene: WBGene00241240
    Corresponding_transcript: OVOC4431c.1
    Corresponding_protein: OVP14582
    Brief_identification: AO66 ankyrin homolog Person_evidence: WBPerson2973
    RNASeq_FPKM: WBls:0000104 (15)
      WBls:0000107 2.3029 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
      WBls:0000108 1.13237 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
        11.4469 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
        14.2339 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
      WBls:0000664 4.46249 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
        7.22167 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
    Remark: [141105 mh6] Created this isoform based on the RNASeq splice data. Curator_confirmed: WBPerson4055
        From_analysis: RNASeq
  Method: curated