WormBase Tree Display for CDS: OVOC36
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OVOC36 | Evidence | Curator_confirmed | WBPerson2062 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | OVOC_OM1b_1 | |||
Structure | Source_exons | 1 | 222 | |||
685 | 780 | |||||
1370 | 1543 | |||||
DB_info | DB_remark | OVO-HINT-1 protein; contains similarity to Pfam domain PF01230 (HIT domain); contains similarity to Interpro domains IPR001310 (Histidine triad (HIT) protein), IPR036265 (HIT-like superfamily) | ||||
Origin | From_laboratory | MGM | ||||
Species | Onchocerca volvulus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00236845 | ||||
Corresponding_transcript | OVOC36.1 | |||||
Corresponding_protein | OVP02057 | |||||
Matching_cDNA | AA668091 | Inferred_automatically | transcript_builder.pl | |||
BF727560 | Inferred_automatically | transcript_builder.pl | ||||
ovolvulus_GG644|c28_g1_i14 | Inferred_automatically | transcript_builder.pl | ||||
Brief_identification | Histidine triad nucleotide-binding protein 1 homolog | Person_evidence | WBPerson2973 | |||
RNASeq_FPKM | WBls:0000104 (15) | |||||
WBls:0000107 | 194.433 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 201.308 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | |||
302.605 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
349.922 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
WBls:0000664 | 559.033 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
564.967 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||
Method | curated |