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WormBase Tree Display for CDS: OVOC3016

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Name Class

OVOC3016SMapS_parentSequenceOVOC_OM1b_119
StructureSource_exons (23)
DB_infoDB_remarkcontains similarity to Pfam domains PF00955 (HCO3- transporter family), PF07565 (Band 3 cytoplasmic domain); contains similarity to Interpro domains IPR011531 (Bicarbonate transporter-like, transmembrane domain), IPR016152 (Phosphotransferase/anion transporter), IPR013769 (Band 3 cytoplasmic domain), IPR003020 (Bicarbonate transporter, eukaryotic)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00239825
Corresponding_transcriptOVOC3016.1
OVOC3016.2
Corresponding_proteinOVP05389
Matching_cDNAovolvulus_GG561|c81_g1_i8Inferred_automaticallytranscript_builder.pl
ovolvulus_GG561|c81_g1_i14Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:0000104 (15)
WBls:000010720.5279From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010841.8163From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
43.9517From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
52.4231From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:00006645.26134From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
6.12816From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Methodcurated