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WormBase Tree Display for CDS: OVOC17

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Name Class

OVOC17EvidenceCurator_confirmedWBPerson4055
SMapS_parentSequenceOVOC_OM1b_1
StructureSource_exons163
1140011603
1302513288
1363313792
1450014715
1487414991
1509015267
DB_infoDB_remarkOVO-DMSR-2 protein; contains similarity to Pfam domain PF10324 (Serpentine type 7TM GPCR chemoreceptor Srw); contains similarity to Interpro domains IPR019427 (7TM GPCR, serpentine receptor class w (Srw)), IPR000276 (G protein-coupled receptor, rhodopsin-like)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00236826
Corresponding_transcriptOVOC17.1
Corresponding_proteinOVP14777
Matching_cDNAovolvulus_GG641|c32_g4_i2Inferred_automaticallytranscript_builder.pl
ovolvulus_GG641|c32_g4_i3Inferred_automaticallytranscript_builder.pl
ovolvulus_GG641|c32_g4_i4Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:0000104 (15)
WBls:00001077.61178From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001083.97415From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
6.79123From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
7.37763From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
WBls:00006641.9182From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
2.23341From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
Last_reviewed26 Jun 2018 14:54:14WBPerson4055
Remark[180626 mh6] This CDS has been updated based on the RNAseq data.Curator_confirmedWBPerson4055
From_analysisRNASeq
Methodcurated