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WormBase Tree Display for CDS: OVOC157

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Name Class

OVOC157SMapS_parentSequenceOVOC_OM1b_5
StructureSource_exons1119
455625
743812
14121498
20482212
24872588
27522916
46554884
54375674
DB_infoDB_remarkOVO-UNC-73 protein; contains similarity to Pfam domain PF00621 (RhoGEF domain); contains similarity to Interpro domains IPR000219 (Dbl homology (DH) domain), IPR035899 (Dbl homology (DH) domain superfamily), IPR001849 (Pleckstrin homology domain), IPR011993 (PH-like domain superfamily)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00236966
Corresponding_transcriptOVOC157.1
OVOC157.2
Corresponding_proteinOVP08305
Matching_cDNAovolvulus_GG633|c82_g3_i4Inferred_automaticallytranscript_builder.pl
ovolvulus_GG633|c82_g3_i6Inferred_automaticallytranscript_builder.pl
ovolvulus_GG633|c82_g3_i9Inferred_automaticallytranscript_builder.pl
ovolvulus_GG633|c82_g3_i13Inferred_automaticallytranscript_builder.pl
Brief_identificationRho guanine nucleotide exchange factor 25 homologPerson_evidenceWBPerson2973
RNASeq_FPKMWBls:0000104 (15)
WBls:00001074.43755From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010814.8851From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
19.0849From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
3.89474From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:00006648.72058From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
8.9939From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Methodcurated