WormBase Tree Display for CDS: OVOC1513c

OVOC1513c SMap: S_parent: Sequence: OVOC_OM1b_61
  Structure: Source_exons: 1 147
      383 643
      871 984
      1151 1316
      1414 1517
      2048 2284
  DB_info: DB_remark: OVO-POP-1 protein; contains similarity to Pfam domain PF00505 (HMG (high mobility group) box); contains similarity to Interpro domains IPR036910 (High mobility group box domain superfamily), IPR009071 (High mobility group box domain), IPR024940 (Transcription factor TCF/LEF)
  Origin: From_laboratory: HX
    Species: Onchocerca volvulus
  Properties: Coding: CDS
      Prediction_status: Confirmed
    Isoform: Curator_confirmed: WBPerson4055
      Feature_evidence: WBsf920466
  Visible: Gene: WBGene00238322
    Corresponding_transcript: OVOC1513c.1
    Corresponding_protein: OVP14585
    Brief_identification: Protein pop-1 homolog Person_evidence: WBPerson2973
    RNASeq_FPKM: WBls:0000104 (13)
      WBls:0000107 0.002254 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
      WBls:0000108 0.000137 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
        1.6e-05 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
        6.8e-05 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
      WBls:0000664 0.37289 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
        2.88031 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
    Remark: [141105 mh6] Created this isoform based on the RNASeq splice data and the SL1 site. Curator_confirmed: WBPerson4055
        Feature_evidence: WBsf920466
        From_analysis: RNASeq
  Method: curated