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WormBase Tree Display for CDS: OVOC12231

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Name Class

OVOC12231EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OO_000003
StructureSource_exons (19)
DB_infoDB_remarkOVO-DAAM-1 protein; contains similarity to Pfam domains PF02181 (Formin Homology 2 Domain), PF06367 (Diaphanous FH3 Domain), PF06371 (Diaphanous GTPase-binding Domain); contains similarity to Interpro domains IPR010473 (Formin, GTPase-binding domain), IPR010472 (Formin, FH3 domain), IPR015425 (Formin, FH2 domain), IPR042201 (Formin, FH2 domain superfamily), IPR011989 (Armadillo-like helical), IPR016024 (Armadillo-type fold)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00249040
Corresponding_transcriptOVOC12231.1
Corresponding_proteinOVP13677
Matching_cDNAovolvulus_GG446|c51_g1_i1Inferred_automaticallytranscript_builder.pl
ovolvulus_GG446|c52_g4_i3Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:0000104 (15)
WBls:00001070.967551From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001080.471452From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
18.5506From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
5.26827From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:00006641.29929From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
2.08763From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Remark[140605 es9] Merged OVOC12231, OVOC12232 and OVOC12233 based on RNA-Seq and protein evidence data.Curator_confirmedWBPerson2062
Methodcurated