WormBase Tree Display for CDS: OVOC1064a
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OVOC1064a | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | OVOC_OM1b_13 | |||
Structure | Source_exons | 1 | 66 | |||
5272 | 5601 | |||||
5972 | 6202 | |||||
6430 | 6948 | |||||
7401 | 7556 | |||||
7807 | 7944 | |||||
8104 | 8351 | |||||
8847 | 9087 | |||||
DB_info | DB_remark | OVO-UNC-37 protein; contains similarity to Pfam domains PF00400 (WD domain, G-beta repeat), PF03920 (Groucho/TLE N-terminal Q-rich domain); contains similarity to Interpro domains IPR001680 (WD40 repeat), IPR005617 (Groucho/TLE, N-terminal Q-rich domain), IPR036322 (WD40-repeat-containing domain superfamily), IPR009146 (Groucho/transducin-like enhancer), IPR015943 (WD40/YVTN repeat-like-containing domain superfamily) | ||||
Origin | From_laboratory | MGM | ||||
Species | Onchocerca volvulus | |||||
Properties (2) | ||||||
Visible | Gene | WBGene00237873 | ||||
Corresponding_transcript (2) | ||||||
Corresponding_protein | OVP02718 | |||||
Matching_cDNA | AI313777 | Inferred_automatically | transcript_builder.pl | |||
BE420439 | Inferred_automatically | transcript_builder.pl | ||||
ovolvulus_GG640|c116_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
ovolvulus_GG640|c116_g1_i4 | Inferred_automatically | transcript_builder.pl | ||||
ovolvulus_GG640|c116_g1_i10 | Inferred_automatically | transcript_builder.pl | ||||
Brief_identification | Transcription factor homolog | Person_evidence | WBPerson2973 | |||
RNASeq_FPKM | WBls:0000104 (15) | |||||
WBls:0000107 | 43.0585 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 22.4498 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | |||
24.0457 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | ||||
36.1621 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
WBls:0000664 | 54.9001 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
59.4897 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||
Method | curated |