WormBase Tree Display for CDS: K12H4.8
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| K12H4.8 | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | K12H4 | ||
| Structure | Source_exons (27) | ||||
| DB_info | Database | KEGG | KEGG_id | 3.1.21.- | |
| SwissProt | UniProtAcc | P34529 | |||
| UniProt | UniProtAcc | P34529 | |||
| UniProt_GCRP | UniProtAcc | P34529 | |||
| AlphaFold | entry | P34529 | |||
| NCBI_protein | GI_number | GI:379657006 | |||
| TREEFAM | TREEFAM_ID | TF330258 | |||
| Protein_id | CHROMOSOME_III | CCD71200 | 2 | ||
| DB_remark | DCR-1 protein; contains similarity to Pfam domains PF00271 (Helicase conserved C-terminal domain), PF00636 (Ribonuclease III domain), PF02170 (PAZ domain), PF03368 (Dicer dimerisation domain), PF04851 (Type III restriction enzyme, res subunit), PF20930 (Dicer, partner-binding domain), PF20931 (Dicer, platform domain), PF20932 (Dicer, dsRNA-binding domain); contains similarity to Interpro domains IPR048513 (Dicer, partner-binding domain), IPR044441 (Dicer, double-stranded RNA-binding domain), IPR006935 (Helicase/UvrB, N-terminal), IPR003100 (PAZ domain), IPR036085 (PAZ domain superfamily), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR000999 (Ribonuclease III domain), IPR048512 (Dicer, platform domain), IPR036389 (Ribonuclease III, endonuclease domain superfamily), IPR001650 (Helicase, C-terminal domain-like), IPR038248 (Dicer dimerisation domain superfamily), IPR014001 (Helicase superfamily 1/2, ATP-binding domain), IPR005034 (Dicer dimerisation domain) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Visible (12) | |||||
| Associated_feature | WBsf126249 | ||||
| Method | curated |
