WormBase Tree Display for CDS: K11D2.2
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| K11D2.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | K11D2 | |||
| Structure | Source_exons | 1 | 143 | |||
| 975 | 1609 | |||||
| 1773 | 1966 | |||||
| 2178 | 2387 | |||||
| DB_info | Database | KEGG | KEGG_id | 3.5.1.23 | ||
| SwissProt | UniProtAcc | O45686 | ||||
| UniProt | UniProtAcc | O45686 | ||||
| UniProt_GCRP | UniProtAcc | O45686 | ||||
| AlphaFold | entry | O45686 | ||||
| NCBI_protein | GI_number | GI:3878504 | ||||
| TREEFAM | TREEFAM_ID | TF313219 | ||||
| Protein_id | CHROMOSOME_I | CAB05556 | 1 | |||
| DB_remark | ASAH-1 protein; contains similarity to Pfam domains PF02275 (Linear amide C-N hydrolases, choloylglycine hydrolase family), PF15508 (beta subunit of N-acylethanolamine-hydrolyzing acid amidase); contains similarity to Interpro domains IPR029132 (Choloylglycine hydrolase/NAAA C-terminal), IPR029130 (Acid ceramidase, N-terminal), IPR016699 (Acid ceramidase-like) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00010769 | ||||
| Corresponding_transcript | K11D2.2.1 | |||||
| Corresponding_protein | CE12120 | |||||
| Corresponding_PCR_product | cenix:72-d5 | |||||
| mv_K11D2.2 | ||||||
| sjj_K11D2.2 | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA (80) | ||||||
| RNAi_result | WBRNAi00034283 | |||||
| WBRNAi00063174 | ||||||
| WBRNAi00090564 | ||||||
| WBRNAi00001097 | ||||||
| WBRNAi00003984 | ||||||
| WBRNAi00050596 | ||||||
| Microarray_results (19) | ||||||
| Brief_identification | Acid ceramidase subunit beta | Accession_evidence | UniProt | SP:O45686 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
