WormBase Tree Display for CDS: K07C5.4
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K07C5.4 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | K07C5 | |||
Structure | Source_exons | 1 | 99 | |||
285 | 399 | |||||
450 | 604 | |||||
686 | 793 | |||||
839 | 1073 | |||||
1253 | 1585 | |||||
1755 | 2029 | |||||
2210 | 2350 | |||||
DB_info | Database | SwissProt | UniProtAcc | Q21276 | ||
UniProt | UniProtAcc | Q21276 | ||||
UniProt_GCRP | UniProtAcc | Q21276 | ||||
AlphaFold | entry | Q21276 | ||||
NCBI_protein | GI_number | GI:3878324 | ||||
TREEFAM | TREEFAM_ID | TF105713 | ||||
Protein_id | CHROMOSOME_V | CAA94897 | 1 | |||
DB_remark | NOL-56 protein; contains similarity to Pfam domains PF01798 (snoRNA binding domain, fibrillarin), PF08156 (NOP5NT (NUC127) domain); contains similarity to Interpro domains IPR036070 (Nop domain superfamily), IPR012976 (NOSIC), IPR012974 (Nucleolar protein 58/56, N-terminal), IPR042239 (Nop, C-terminal domain), IPR045056 (Nucleolar protein Nop56/Nop58), IPR002687 (Nop domain) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00010627 | ||||
Corresponding_transcript | K07C5.4.1 | |||||
Corresponding_protein | CE06114 | |||||
Corresponding_PCR_product | WBPaper00038381:K07C5_1_1 | |||||
cenix:11-d9 | ||||||
mv_K07C5.4 | ||||||
sjj_K07C5.4 | ||||||
Corresponding_oligo_set (19) | ||||||
Matching_cDNA (247) | ||||||
RNAi_result (11) | ||||||
Microarray_results (20) | ||||||
Brief_identification | Nucleolar protein 56 | Accession_evidence | UniProt | SP:Q21276 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf000454 | |||||
Method | curated |