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WormBase Tree Display for CDS: K07C5.4

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Name Class

K07C5.4EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceK07C5
StructureSource_exons199
285399
450604
686793
8391073
12531585
17552029
22102350
DB_infoDatabaseSwissProtUniProtAccQ21276
UniProtUniProtAccQ21276
UniProt_GCRPUniProtAccQ21276
AlphaFoldentryQ21276
NCBI_proteinGI_numberGI:3878324
TREEFAMTREEFAM_IDTF105713
Protein_idCHROMOSOME_VCAA948971
DB_remarkNOL-56 protein; contains similarity to Pfam domains PF01798 (snoRNA binding domain, fibrillarin), PF08156 (NOP5NT (NUC127) domain); contains similarity to Interpro domains IPR036070 (Nop domain superfamily), IPR012976 (NOSIC), IPR012974 (Nucleolar protein 58/56, N-terminal), IPR042239 (Nop, C-terminal domain), IPR045056 (Nucleolar protein Nop56/Nop58), IPR002687 (Nop domain)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00010627
Corresponding_transcriptK07C5.4.1
Corresponding_proteinCE06114
Corresponding_PCR_productWBPaper00038381:K07C5_1_1
cenix:11-d9
mv_K07C5.4
sjj_K07C5.4
Corresponding_oligo_set (19)
Matching_cDNA (247)
RNAi_result (11)
Microarray_results (20)
Brief_identificationNucleolar protein 56Accession_evidenceUniProtSP:Q21276
RNASeq_FPKM (74)
Associated_featureWBsf000454
Methodcurated