WormBase Tree Display for CDS: F59B2.3
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| F59B2.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F59B2 | |||
| Structure | Source_exons | 1 | 189 | |||
| 236 | 290 | |||||
| 340 | 488 | |||||
| 1561 | 1615 | |||||
| 1853 | 2157 | |||||
| 2226 | 2592 | |||||
| 2643 | 2779 | |||||
| DB_info | Database | KEGG | KEGG_id | 3.5.1.25 | ||
| SwissProt | UniProtAcc | P34480 | ||||
| UniProt | UniProtAcc | P34480 | ||||
| UniProt_GCRP | UniProtAcc | P34480 | ||||
| AlphaFold | entry | P34480 | ||||
| NCBI_protein | GI_number | GI:3877845 | ||||
| TREEFAM | TREEFAM_ID | TF315036 | ||||
| Protein_id | CHROMOSOME_III | CAA77585 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF01979 (Amidohydrolase family); contains similarity to Interpro domains IPR032466 (Metal-dependent hydrolase), IPR011059 (Metal-dependent hydrolase, composite domain superfamily), IPR003764 (N-acetylglucosamine-6-phosphate deacetylase), IPR006680 (Amidohydrolase-related) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00010308 | ||||
| Corresponding_transcript | F59B2.3.1 | |||||
| Corresponding_protein | CE00231 | |||||
| Corresponding_PCR_product | TH:300B10 | |||||
| cenix:300-b10 | ||||||
| mv_F59B2.3 | ||||||
| sjj_F59B2.3 | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA (33) | ||||||
| RNAi_result | WBRNAi00033183 | |||||
| WBRNAi00076504 | ||||||
| WBRNAi00049146 | ||||||
| WBRNAi00005022 | ||||||
| WBRNAi00016078 | ||||||
| Microarray_results (20) | ||||||
| Brief_identification | N-acetylglucosamine-6-phosphate deacetylase | Accession_evidence | UniProt | SP:P34480 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf127672 | |||||
| Method | curated |
