WormBase Tree Display for CDS: F58G6.8
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F58G6.8 | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | F58G6 | ||
Structure | Source_exons | 1 | 51 | ||
99 | 199 | ||||
403 | 739 | ||||
DB_info | Database | TrEMBL | UniProtAcc | A0A8D6UGU9 | |
UniProt | UniProtAcc | A0A8D6UGU9 | |||
UniProt_GCRP | UniProtAcc | A0A8D6UGU9 | |||
AlphaFold | entry | A0A8D6UGU9 | |||
TREEFAM | TREEFAM_ID | TF322793 | |||
Protein_id | CHROMOSOME_IV | CAE17833 | 2 | ||
DB_remark | DEGL-2 protein; contains similarity to Pfam domain PF00858 (Amiloride-sensitive sodium channel); contains similarity to Interpro domain IPR001873 (Epithelial sodium channel) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Visible | Gene | WBGene00010278 | |||
Corresponding_transcript | F58G6.8.1 | ||||
Corresponding_protein | CE54337 | ||||
Corresponding_PCR_product | mv_F58G6.6 | ||||
sjj2_F58G6.8 | |||||
Corresponding_oligo_set (11) | |||||
Matching_cDNA | L1_Nanopore_Li_272418 | Inferred_automatically | transcript_builder.pl | ||
Microarray_results (12) | |||||
RNASeq_FPKM (74) | |||||
Last_reviewed | 10 Mar 2021 14:09:13 | WBPerson51134 | |||
Remark | [030722 dl] Predicted by Avril Coghlan's comparative analysis of elegans and briggsae. This prediction is supported by briggsae similarity | Curator_confirmed | WBPerson1846 | ||
[210310 skd] Moved START to the next ATG on the same frame to better match RNASeq evidence. | Curator_confirmed | WBPerson51134 | |||
From_analysis | RNASeq | ||||
Method | curated |