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WormBase Tree Display for CDS: F58G6.8

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Name Class

F58G6.8EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceF58G6
StructureSource_exons151
99199
403739
DB_infoDatabaseTrEMBLUniProtAccA0A8D6UGU9
UniProtUniProtAccA0A8D6UGU9
UniProt_GCRPUniProtAccA0A8D6UGU9
AlphaFoldentryA0A8D6UGU9
TREEFAMTREEFAM_IDTF322793
Protein_idCHROMOSOME_IVCAE178332
DB_remarkDEGL-2 protein; contains similarity to Pfam domain PF00858 (Amiloride-sensitive sodium channel); contains similarity to Interpro domain IPR001873 (Epithelial sodium channel)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00010278
Corresponding_transcriptF58G6.8.1
Corresponding_proteinCE54337
Corresponding_PCR_productmv_F58G6.6
sjj2_F58G6.8
Corresponding_oligo_set (11)
Matching_cDNAL1_Nanopore_Li_272418Inferred_automaticallytranscript_builder.pl
Microarray_results (12)
RNASeq_FPKM (74)
Last_reviewed10 Mar 2021 14:09:13WBPerson51134
Remark[030722 dl] Predicted by Avril Coghlan's comparative analysis of elegans and briggsae. This prediction is supported by briggsae similarityCurator_confirmedWBPerson1846
[210310 skd] Moved START to the next ATG on the same frame to better match RNASeq evidence.Curator_confirmedWBPerson51134
From_analysisRNASeq
Methodcurated