WormBase Tree Display for CDS: F58B3.5a
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F58B3.5a | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | F58B3 | ||
Structure | Source_exons | 1 | 80 | ||
133 | 456 | ||||
503 | 1956 | ||||
2287 | 2391 | ||||
2443 | 3101 | ||||
3175 | 3306 | ||||
DB_info | Database | KEGG | KEGG_id | 6.1.1.10 | |
SwissProt | UniProtAcc | Q20970 | |||
UniProt | UniProtAcc | Q20970 | |||
UniProt_GCRP | UniProtAcc | Q20970 | |||
AlphaFold | entry | Q20970 | |||
NCBI_protein | GI_number | GI:3877884 | |||
TREEFAM | TREEFAM_ID | TF300526 | |||
Protein_id | CHROMOSOME_IV | CAA97803 | 1 | ||
DB_remark | MARS-1 protein; contains similarity to Pfam domains PF01588 (Putative tRNA binding domain), PF09334 (tRNA synthetases class I (M)), PF19303 (Anticodon binding domain of methionyl tRNA ligase); contains similarity to Interpro domains IPR002547 (tRNA-binding domain), IPR041872 (Methionyl-tRNA synthetase, anticodon-binding domain), IPR009080 (Aminoacyl-tRNA synthetase, class Ia, anticodon-binding), IPR029038 (Methionyl-tRNA synthetase, Zn-domain), IPR015413 (Methionyl/Leucyl tRNA synthetase), IPR033911 (Methioninyl-tRNA synthetase core domain), IPR023458 (Methionine-tRNA ligase, type 1), IPR012340 (Nucleic acid-binding, OB-fold), IPR014729 (Rossmann-like alpha/beta/alpha sandwich fold), IPR014758 (Methionyl-tRNA synthetase) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Isoform | Accession_evidence | NDB | BJ756832 | ||
Visible (11) | |||||
Associated_feature | WBsf016914 | ||||
Method | curated |